STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF470Zinc finger protein 470. (714 aa)    
Predicted Functional Partners:
CYP20A1
Cytochrome P450 family 20 subfamily A member 1.
   
 0.488
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.471
KLHDC1
Kelch domain containing 1.
    
 
 0.469
ZC3H8
Zinc finger CCCH-type containing 8.
     
 0.450
LANCL1
LanC like 1.
   
  
 0.435
MED6
Mediator complex subunit 6.
   
 
 0.435
APLF
Aprataxin and PNKP like factor.
    
 
 0.430
PDCL3
Phosducin like 3.
      
 0.424
C12orf50
Chromosome 12 open reading frame 50.
      
 0.424
OCIAD2
OCIA domain containing 2.
      
 0.424
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.