STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113876112NACHT domain-containing protein. (937 aa)    
Predicted Functional Partners:
PYCARD
PYD and CARD domain containing.
   
 0.896
NLRC4
NLR family CARD domain containing 4.
   
 
 0.612
CASP1
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.601
A0A4W2C0F8
Uncharacterized protein.
  
   
 0.561
PANK4
4'-phosphopantetheine phosphatase; May play a role in the physiological regulation of coenzyme A (CoA) intracellular levels. The phosphatase activity shows preference for normal or oxidatively damaged intermediates of 4'- phosphopantetheine, which provides strong indirect evidence that the phosphatase activity pre-empts damage in the CoA pathway.
    
 0.561
NLRP1
NLR family pyrin domain containing 1.
    
0.535
ZNF618
Zinc finger protein 618.
   
  
 0.522
PADI6
Peptidyl arginine deiminase 6.
   
  
 0.510
TLE6
TLE family member 6, subcortical maternal complex member.
    
 
 0.494
OOEP
Oocyte expressed protein.
      
 0.493
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.