STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL6BBCL6B transcription repressor. (515 aa)    
Predicted Functional Partners:
NEB
Nebulin.
    
  0.669
NCOR1
Nuclear receptor corepressor 1.
    
 0.650
NCOR2
Nuclear receptor corepressor 2.
    
 0.650
ETV5
ETS variant 5.
     
 0.589
ATOH8
Atonal bHLH transcription factor 8.
    
 
 0.571
LHX1
LIM homeobox 1.
    
 
 0.511
NANOS2
Nanos C2HC-type zinc finger 2; Belongs to the nanos family.
    
 
 0.504
SMAD3
Mothers against decapentaplegic homolog.
   
 0.504
POU3F1
POU domain protein.
    
 0.501
BCL6
BCL6 transcription repressor.
    
 
0.498
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.