STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF79Zinc finger protein 79. (499 aa)    
Predicted Functional Partners:
RNF112
Ring finger protein 112.
   
 0.509
LOC113906743
Uncharacterized protein.
    
 
 0.501
LOC113875591
KRAB domain-containing protein.
   
  
 0.500
DEF8
Differentially expressed in FDCP 8 homolog.
      
 0.497
CSNK1G1
Casein kinase 1 gamma 1; Belongs to the protein kinase superfamily.
     
 0.483
ZNF282
Zinc finger protein 282.
   
  
0.473
FBXL4
F-box and leucine rich repeat protein 4.
   
 
 0.472
AKAP7
AKAP7_NLS domain-containing protein.
      
 0.463
DUSP26
Dual specificity phosphatase 26; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
 0.441
KCNN3
Potassium calcium-activated channel subfamily N member 3.
      
 0.422
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (26%) [HD]