STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNERDelta/notch like EGF repeat containing. (1010 aa)    
Predicted Functional Partners:
LGI1
Leucine rich glioma inactivated 1.
   
  
 0.784
ARHGAP26
Rho GTPase activating protein 26.
      
 0.723
BIN1
Bridging integrator 1.
   
 
 0.713
PNMA2
PNMA family member 2.
   
 0.696
ZIC4
Zic family member 4.
   
 0.622
AMPH
Amphiphysin.
   
 
 0.607
NSG2
Neuronal vesicle trafficking associated 2.
   
  
 0.602
HOMER3
WH1 domain-containing protein.
    
 
 0.592
TRIP12
Thyroid hormone receptor interactor 12.
      
 0.556
FBXO36
F-box protein 36.
      
 0.551
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.