STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO3Transmembrane and coiled-coil domains 3. (677 aa)    
Predicted Functional Partners:
CNEP1R1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.636
TYSND1
Trypsin domain containing 1.
     
 0.614
NQO1
NAD(P)H quinone dehydrogenase 1.
  
 
 0.593
NQO2
N-ribosyldihydronicotinamide:quinone reductase 2.
  
 
 0.593
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
      
 0.580
TFPT
TCF3 fusion partner.
      
 0.580
ADPRHL1
ADP-ribosylhydrolase like 1.
      
 0.575
ACSM1
Acyl-CoA synthetase medium chain family member 1.
     
 0.511
SLC25A33
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.506
FNDC5
Fibronectin type III domain containing 5.
    
 
 0.503
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.