STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL4A2Collagen type IV alpha 2 chain. (1824 aa)    
Predicted Functional Partners:
COL4A1
Collagen type IV alpha 1 chain.
  
0.999
COL4A3
Collagen type IV alpha 3 chain.
  
0.998
LAMB1
Laminin subunit beta 1.
   
 0.919
CD44
CD44 molecule (Indian blood group).
    
 0.908
A0A4W2CL25
Uncharacterized protein.
     
 0.892
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
     
 0.881
COL1A2
Collagen type I alpha 2 chain.
  
0.881
LAMA3
Laminin subunit alpha 3.
   
 0.876
COL6A2
Collagen type VI alpha 2 chain.
   
0.872
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
    
 0.871
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.