STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UVSSAUV stimulated scaffold protein A. (691 aa)    
Predicted Functional Partners:
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.993
USP7
Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.
    
 0.973
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 
 0.949
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 
 0.903
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.885
DDB1
Damage specific DNA binding protein 1.
    
 
 0.814
NEPRO
Nucleolus and neural progenitor protein.
      
 0.768
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.768
USP40
Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family.
    
 0.748
LOC113896608
Olfactory receptor.
      
 0.743
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.