STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARID5AAT-rich interaction domain 5A. (592 aa)    
Predicted Functional Partners:
SBNO2
Strawberry notch homolog 2.
   
  
 0.622
SAP30
Sin3A associated protein 30.
    
 0.608
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
    
 
 0.552
ADGRE3
Adhesion G protein-coupled receptor E3; Belongs to the G-protein coupled receptor 2 family.
      
 0.531
PBRM1
Polybromo 1.
   
 
 0.527
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.494
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
   
  
 0.494
CSRNP1
Cysteine and serine rich nuclear protein 1.
   
  
 0.494
MRPL55
Mitochondrial ribosomal protein L55.
      
 0.493
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
      
 0.487
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.