STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (816 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.769
TRIM8
Tripartite motif containing 8.
    
 
 0.699
UBC
Ubiquitin C.
   
  0.598
A0A4W2E0Q1
Ubiquitin-like domain-containing protein.
   
  0.598
KIF21B
Kinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.596
ZFP30
ZFP30 zinc finger protein.
   
 0.594
TRIM66
Tripartite motif containing 66.
      
0.590
TRIM35
Tripartite motif containing 35.
      
0.574
EI24
EI24 autophagy associated transmembrane protein.
      
 0.570
TRIM11
Tripartite motif containing 11.
      
0.537
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.