STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38BTransmembrane protein 38B. (291 aa)    
Predicted Functional Partners:
SEC14L4
SEC14 like lipid binding 4.
      
 0.695
P3H1
Prolyl 3-hydroxylase 1.
      
 0.572
KRTCAP3
Keratinocyte associated protein 3.
      
 0.565
LOC113897489
NUT domain-containing protein.
      
 0.554
FKBP10
Peptidylprolyl isomerase.
      
 0.519
CDKAL1
CDK5 regulatory subunit associated protein 1 like 1.
   
  
 0.499
MCRIP1
MAPK regulated corepressor interacting protein 1.
      
 0.495
SLA
Src like adaptor.
   
  
 0.493
IFITM5
Interferon induced transmembrane protein 5.
      
 0.491
CCDC134
Coiled-coil domain containing 134.
      
 0.487
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.