Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATOH1 | GFI1 | A0A4W2I079 | A0A4W2D380 | Atonal bHLH transcription factor 1. | Growth factor independent 1 transcriptional repressor. | 0.752 |
ATOH1 | MYO6 | A0A4W2I079 | A0A4W2CCU6 | Atonal bHLH transcription factor 1. | Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.422 |
ATOH1 | MYO7A | A0A4W2I079 | A0A4W2CE90 | Atonal bHLH transcription factor 1. | Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.799 |
ATOH1 | POU4F1 | A0A4W2I079 | A0A4W2CZZ9 | Atonal bHLH transcription factor 1. | POU domain protein. | 0.580 |
ATOH1 | POU4F3 | A0A4W2I079 | A0A4W2GAI1 | Atonal bHLH transcription factor 1. | POU domain protein. | 0.653 |
CEBPE | GFI1 | A0A4W2I9X0 | A0A4W2D380 | CCAAT/enhancer-binding protein. | Growth factor independent 1 transcriptional repressor. | 0.620 |
CEBPE | RUNX1 | A0A4W2I9X0 | A0A4W2F2N6 | CCAAT/enhancer-binding protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.448 |
CEBPE | SPI1 | A0A4W2I9X0 | A0A4W2EKT2 | CCAAT/enhancer-binding protein. | Spi-1 proto-oncogene. | 0.584 |
GATA2 | GFI1 | A0A4W2BR69 | A0A4W2D380 | GATA binding protein 2. | Growth factor independent 1 transcriptional repressor. | 0.572 |
GATA2 | RUNX1 | A0A4W2BR69 | A0A4W2F2N6 | GATA binding protein 2. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.818 |
GATA2 | SPI1 | A0A4W2BR69 | A0A4W2EKT2 | GATA binding protein 2. | Spi-1 proto-oncogene. | 0.682 |
GFI1 | ATOH1 | A0A4W2D380 | A0A4W2I079 | Growth factor independent 1 transcriptional repressor. | Atonal bHLH transcription factor 1. | 0.752 |
GFI1 | CEBPE | A0A4W2D380 | A0A4W2I9X0 | Growth factor independent 1 transcriptional repressor. | CCAAT/enhancer-binding protein. | 0.620 |
GFI1 | GATA2 | A0A4W2D380 | A0A4W2BR69 | Growth factor independent 1 transcriptional repressor. | GATA binding protein 2. | 0.572 |
GFI1 | MYO6 | A0A4W2D380 | A0A4W2CCU6 | Growth factor independent 1 transcriptional repressor. | Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.489 |
GFI1 | MYO7A | A0A4W2D380 | A0A4W2CE90 | Growth factor independent 1 transcriptional repressor. | Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.609 |
GFI1 | POU4F1 | A0A4W2D380 | A0A4W2CZZ9 | Growth factor independent 1 transcriptional repressor. | POU domain protein. | 0.509 |
GFI1 | POU4F3 | A0A4W2D380 | A0A4W2GAI1 | Growth factor independent 1 transcriptional repressor. | POU domain protein. | 0.564 |
GFI1 | RCOR1 | A0A4W2D380 | A0A4W2CNJ1 | Growth factor independent 1 transcriptional repressor. | REST corepressor 1. | 0.494 |
GFI1 | RUNX1 | A0A4W2D380 | A0A4W2F2N6 | Growth factor independent 1 transcriptional repressor. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.604 |
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