STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMTC2Transmembrane O-mannosyltransferase targeting cadherins 2. (856 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.783
INTS1
Integrator complex subunit 1.
    
 0.738
GCSAML
Germinal center associated signaling and motility like.
      
 0.722
INTS5
Integrator complex subunit 5.
    
 0.709
INTS3
Integrator complex subunit 3.
    
 0.709
INTS13
Integrator complex subunit 13.
   
 0.701
CHRND
Cholinergic receptor nicotinic delta subunit.
    
 
 0.699
SAMD12
Sterile alpha motif domain containing 12.
      
 0.660
DSTYK
Dual serine/threonine and tyrosine protein kinase.
    
 0.655
INTS10
Integrator complex subunit 10.
   
 0.651
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.