Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EBNA1BP2 | EMG1 | A0A4W2EWI3 | A0A4W2E4X1 | EBNA1 binding protein 2. | EMG1 N1-specific pseudouridine methyltransferase. | 0.838 |
EBNA1BP2 | IMP4 | A0A4W2EWI3 | A0A4W2F2H9 | EBNA1 binding protein 2. | IMP U3 small nucleolar ribonucleoprotein 4. | 0.897 |
EBNA1BP2 | MRTO4 | A0A4W2EWI3 | A0A4W2DGQ2 | EBNA1 binding protein 2. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.989 |
EBNA1BP2 | NHP2 | A0A4W2EWI3 | A0A4W2ETV0 | EBNA1 binding protein 2. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.931 |
EBNA1BP2 | NIFK | A0A4W2EWI3 | A0A4W2DH70 | EBNA1 binding protein 2. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.993 |
EBNA1BP2 | NIP7 | A0A4W2EWI3 | A0A4W2CF60 | EBNA1 binding protein 2. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.990 |
EBNA1BP2 | NOP16 | A0A4W2EWI3 | A0A4W2D5F3 | EBNA1 binding protein 2. | Uncharacterized protein. | 0.732 |
EBNA1BP2 | RRP15 | A0A4W2EWI3 | A0A4W2EI34 | EBNA1 binding protein 2. | Ribosomal RNA processing 15 homolog. | 0.902 |
EBNA1BP2 | WDR12 | A0A4W2EWI3 | A0A4W2INR4 | EBNA1 binding protein 2. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
EMG1 | EBNA1BP2 | A0A4W2E4X1 | A0A4W2EWI3 | EMG1 N1-specific pseudouridine methyltransferase. | EBNA1 binding protein 2. | 0.838 |
EMG1 | IMP4 | A0A4W2E4X1 | A0A4W2F2H9 | EMG1 N1-specific pseudouridine methyltransferase. | IMP U3 small nucleolar ribonucleoprotein 4. | 0.979 |
EMG1 | MRTO4 | A0A4W2E4X1 | A0A4W2DGQ2 | EMG1 N1-specific pseudouridine methyltransferase. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.802 |
EMG1 | NHP2 | A0A4W2E4X1 | A0A4W2ETV0 | EMG1 N1-specific pseudouridine methyltransferase. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.950 |
EMG1 | NIFK | A0A4W2E4X1 | A0A4W2DH70 | EMG1 N1-specific pseudouridine methyltransferase. | Nucleolar protein interacting with the FHA domain of MKI67. | 0.721 |
EMG1 | NIP7 | A0A4W2E4X1 | A0A4W2CF60 | EMG1 N1-specific pseudouridine methyltransferase. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.935 |
EMG1 | NOP16 | A0A4W2E4X1 | A0A4W2D5F3 | EMG1 N1-specific pseudouridine methyltransferase. | Uncharacterized protein. | 0.767 |
EMG1 | RRP15 | A0A4W2E4X1 | A0A4W2EI34 | EMG1 N1-specific pseudouridine methyltransferase. | Ribosomal RNA processing 15 homolog. | 0.539 |
EMG1 | WDR12 | A0A4W2E4X1 | A0A4W2INR4 | EMG1 N1-specific pseudouridine methyltransferase. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.837 |
IMP4 | EBNA1BP2 | A0A4W2F2H9 | A0A4W2EWI3 | IMP U3 small nucleolar ribonucleoprotein 4. | EBNA1 binding protein 2. | 0.897 |
IMP4 | EMG1 | A0A4W2F2H9 | A0A4W2E4X1 | IMP U3 small nucleolar ribonucleoprotein 4. | EMG1 N1-specific pseudouridine methyltransferase. | 0.979 |
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