STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD3AATPase family AAA domain containing 3A. (586 aa)    
Predicted Functional Partners:
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
    
   0.757
CPNE5
Copine 5.
      
 0.723
SLC25A11
Solute carrier family 25 member 11; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.705
TMBIM6
Transmembrane BAX inhibitor motif containing 6; Belongs to the BI1 family.
      
 0.701
FAM210A
Family with sequence similarity 210 member A.
    
 
 0.601
SSBP1
Single stranded DNA binding protein 1.
    
 
 0.596
EXOSC8
Exosome component 8.
   
  
 0.589
A0A4W2C1F6
Uncharacterized protein.
      
 0.584
TIMM44
Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.
   
  
 0.573
RBM15
RNA binding motif protein 15.
      
 0.570
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.