STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANGEL1Angel homolog 1. (681 aa)    
Predicted Functional Partners:
NSUN6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.579
STRN4
Striatin 4.
      
 0.563
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
   
  
 0.522
CNOT8
CCR4-NOT transcription complex subunit 8.
   
  
 0.505
CNOT7
CCR4-NOT transcription complex subunit 7.
   
  
 0.475
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
    
 
 0.475
TMEM159
Transmembrane protein 159.
      
 0.472
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.468
HEATR6
HEAT repeat containing 6.
      
 0.461
PARN
Poly(A)-specific ribonuclease.
   
  
 0.427
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.