STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HCC1R3H domain and coiled-coil containing 1. (568 aa)    
Predicted Functional Partners:
SVOPL
SVOP like.
      
 0.723
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.582
PAPLN
Papilin, proteoglycan like sulfated glycoprotein.
      
 0.581
PGM2
Phosphoglucomutase 2.
      
 0.579
DMAP1
DNA methyltransferase 1 associated protein 1.
   
  
 0.528
USP4
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.499
JMJD1C
Jumonji domain containing 1C.
      
 0.487
TMEM247
Transmembrane protein 247.
      
 0.472
AGBL3
ATP/GTP binding protein like 3.
      
 0.472
POMT1
Protein O-mannosyltransferase 1.
      
 0.467
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.