STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Ceramide transporter 1. (782 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 0.770
CSNK1G2
Casein kinase 1 gamma 2; Belongs to the protein kinase superfamily.
    
 0.755
DCAF11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
   
  
 0.727
NTPCR
Uncharacterized protein.
      
 0.700
CSNK1G3
Casein kinase 1 gamma 3; Belongs to the protein kinase superfamily.
    
 0.680
A0A4W2CN96
MSP domain-containing protein.
    
 0.641
KRT39
Keratin 39; Belongs to the intermediate filament family.
      
 0.598
CSNK1G1
Casein kinase 1 gamma 1; Belongs to the protein kinase superfamily.
    
 0.598
PCCB
Propionyl-CoA carboxylase subunit beta.
      
 0.583
ETNK1
Ethanolamine kinase 1.
      
 0.579
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.