STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2HGDHD-2-hydroxyglutarate dehydrogenase. (544 aa)    
Predicted Functional Partners:
TRRAP
Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.859
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.853
YEATS4
YEATS domain containing 4.
   
 0.819
EPC1
Enhancer of polycomb homolog.
   
 0.771
EPC2
Enhancer of polycomb homolog.
   
 0.771
L2HGDH
L-2-hydroxyglutarate dehydrogenase.
      
 0.716
ACTL6B
Actin like 6B; Belongs to the actin family.
   
 0.701
ACTL6A
Actin like 6A; Belongs to the actin family.
   
 0.701
MRGBP
MRG domain binding protein.
    
 0.660
RSPH3
Radial spoke head 3.
    
   0.651
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.