Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A4W2F2Y0 | FNTB | A0A4W2F2Y0 | A0A4W2HCA3 | Uncharacterized protein. | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | 0.977 |
A0A4W2F2Y0 | RCE1 | A0A4W2F2Y0 | A0A4W2BUE0 | Uncharacterized protein. | Ras converting CAAX endopeptidase 1. | 0.860 |
A0A4W2F2Y0 | ZMPSTE24 | A0A4W2F2Y0 | A0A4W2DE89 | Uncharacterized protein. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.860 |
CLPB | ZMPSTE24 | A0A4W2E4F9 | A0A4W2DE89 | ClpB homolog, mitochondrial AAA ATPase chaperonin. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.566 |
FNTA | FNTB | A0A4W2BU88 | A0A4W2HCA3 | Uncharacterized protein. | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | 0.989 |
FNTA | ICMT | A0A4W2BU88 | A0A4W2G4R1 | Uncharacterized protein. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.424 |
FNTA | RCE1 | A0A4W2BU88 | A0A4W2BUE0 | Uncharacterized protein. | Ras converting CAAX endopeptidase 1. | 0.868 |
FNTA | ZMPSTE24 | A0A4W2BU88 | A0A4W2DE89 | Uncharacterized protein. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.860 |
FNTB | A0A4W2F2Y0 | A0A4W2HCA3 | A0A4W2F2Y0 | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | Uncharacterized protein. | 0.977 |
FNTB | FNTA | A0A4W2HCA3 | A0A4W2BU88 | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | Uncharacterized protein. | 0.989 |
FNTB | ICMT | A0A4W2HCA3 | A0A4W2G4R1 | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | Protein-S-isoprenylcysteine O-methyltransferase. | 0.572 |
FNTB | RCE1 | A0A4W2HCA3 | A0A4W2BUE0 | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | Ras converting CAAX endopeptidase 1. | 0.966 |
FNTB | ZMPSTE24 | A0A4W2HCA3 | A0A4W2DE89 | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.961 |
ICMT | FNTA | A0A4W2G4R1 | A0A4W2BU88 | Protein-S-isoprenylcysteine O-methyltransferase. | Uncharacterized protein. | 0.424 |
ICMT | FNTB | A0A4W2G4R1 | A0A4W2HCA3 | Protein-S-isoprenylcysteine O-methyltransferase. | Protein farnesyltransferase subunit beta; Essential subunit of the farnesyltransferase complex. Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. | 0.572 |
ICMT | LMNB2 | A0A4W2G4R1 | A0A4W2ERE1 | Protein-S-isoprenylcysteine O-methyltransferase. | Lamin B2; Belongs to the intermediate filament family. | 0.485 |
ICMT | RCE1 | A0A4W2G4R1 | A0A4W2BUE0 | Protein-S-isoprenylcysteine O-methyltransferase. | Ras converting CAAX endopeptidase 1. | 0.973 |
ICMT | ZMPSTE24 | A0A4W2G4R1 | A0A4W2DE89 | Protein-S-isoprenylcysteine O-methyltransferase. | CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. | 0.974 |
LMNA | LMNB1 | A0A4W2EZY9 | A0A4W2ESA5 | Lamin A/C; Belongs to the intermediate filament family. | Lamin B1; Belongs to the intermediate filament family. | 0.971 |
LMNA | LMNB2 | A0A4W2EZY9 | A0A4W2ERE1 | Lamin A/C; Belongs to the intermediate filament family. | Lamin B2; Belongs to the intermediate filament family. | 0.968 |
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