STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCYOX1LPrenylcysteine oxidase 1 like. (572 aa)    
Predicted Functional Partners:
PCYOX1
Prenylcysteine oxidase 1.
  
  
 
0.737
USP39
Ubiquitin specific peptidase 39.
      
 0.706
PRSS23
Serine protease 23.
      
 0.683
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.583
VPS53
VPS53 subunit of GARP complex.
      
 0.582
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.578
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.577
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
      
 0.487
SYT10
Synaptotagmin 10.
      
 0.473
C1QB
C1q domain-containing protein.
   
  
 0.457
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.