STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1Bromodomain and WD repeat domain containing 1. (2323 aa)    
Predicted Functional Partners:
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.935
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
 0.848
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.837
PHIP
Pleckstrin homology domain interacting protein.
  
  
0.807
CEP350
Centrosomal protein 350.
   
 
  0.792
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
   0.777
A0A4W2EIX9
SANT domain-containing protein.
   
    0.771
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.748
RANBP2
RAN binding protein 2.
   
 0.733
LOC113887693
Histone H3; Belongs to the histone H3 family.
    
  0.724
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.