STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BACE2Beta-secretase 2; Belongs to the peptidase A1 family. (514 aa)    
Predicted Functional Partners:
RTN3
Reticulon.
   
 0.960
RTN4
Reticulon.
   
 0.959
BACE1
Beta-secretase 1; Belongs to the peptidase A1 family.
  
  
 
0.945
APP
Amyloid beta precursor protein.
    
 0.743
APH1B
Aph-1 homolog B, gamma-secretase subunit.
      
 0.720
PSEN2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 
 0.691
APLP2
Amyloid beta precursor like protein 2.
    
 0.625
CACHD1
Cache domain containing 1.
      
 0.613
APLP1
Amyloid beta precursor like protein 1.
    
 0.600
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 0.589
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.