STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC41Leucine rich repeat containing 41. (814 aa)    
Predicted Functional Partners:
RHOBTB3
Rho related BTB domain containing 3.
    
 0.648
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.610
RNF7
Ring finger protein 7.
    
 0.587
ASB2
Ankyrin repeat and SOCS box containing 2.
     
 0.506
ARMT1
Acidic residue methyltransferase 1.
      
 0.487
A0A4W2FLF9
RING-type domain-containing protein.
    
 0.481
RBX1
RING-type domain-containing protein.
    
 0.481
LOC113897295
Uncharacterized protein.
    
 0.466
ASB6
Ankyrin repeat and SOCS box containing 6.
     
 0.433
ASB12
Ankyrin repeat and SOCS box containing 12.
     
 0.426
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.