STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1A2Solute carrier organic anion transporter family member. (666 aa)    
Predicted Functional Partners:
ACOT11
Acyl-CoA thioesterase 11.
   
  
 0.971
LIX1
Limb and CNS expressed 1.
   
  
 0.938
RUBCNL
Rubicon like autophagy enhancer.
   
    0.935
UGT3A2
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.935
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.935
PGM2
Phosphoglucomutase 2.
   
    0.935
A0A4W2DG35
Uncharacterized protein.
   
    0.935
A0A4W2F2X3
KRAB domain-containing protein.
   
    0.935
C1orf109
Chromosome 1 open reading frame 109.
   
    0.935
A0A4W2EJD9
Uncharacterized protein.
   
    0.911
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.