STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDNFNeuron derived neurotrophic factor. (573 aa)    
Predicted Functional Partners:
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.703
PARM1
Prostate androgen-regulated mucin-like protein 1.
      
 0.696
THEM5
Thioesterase superfamily member 5.
      
 0.684
RELN
Reelin.
      
 0.577
SNCG
Gamma-synuclein; Belongs to the synuclein family.
      
 0.574
GABRD
Gamma-aminobutyric acid type A receptor delta subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.499
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.497
VTA1
Vesicle trafficking 1.
      
 0.497
SLC17A8
Solute carrier family 17 member 8.
      
 0.495
FBLN7
Fibulin 7.
      
 0.493
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.