STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBED1Zinc finger BED-type containing 1. (707 aa)    
Predicted Functional Partners:
MRM1
Mitochondrial rRNA methyltransferase 1.
      
 0.497
MPHOSPH6
M-phase phosphoprotein 6.
      
 0.497
GPATCH1
G-patch domain containing 1.
      
 0.489
CATSPER3-2
Pterin-4 alpha-carbinolamine dehydratase 2.
      
 0.479
A0A4W2IFX3
Uncharacterized protein.
      
 0.479
RASSF5
Ras association domain family member 5.
      
 0.420
CDC16
Cell division cycle 16.
   
  
 0.409
ZFHX4
Zinc finger homeobox 4.
      
 0.400
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.