STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXP1Fork-head domain-containing protein. (691 aa)    
Predicted Functional Partners:
SHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.710
TSHZ1
Teashirt zinc finger homeobox 1.
      
 0.695
IRX1
Iroquois homeobox 1.
      
 0.633
FOXP2
Forkhead box P2.
  
 
 
0.627
FOXP4
Forkhead box P4.
    
 
0.569
NFATC2
Nuclear factor of activated T cells 2.
    
 0.552
LHX3
LIM homeobox 3.
    
 
 0.512
NANOG
Homeobox domain-containing protein.
     
 0.498
HOXC6
Homeobox C6.
      
 0.497
IHH
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.495
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.