STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD2C2 calcium dependent domain containing 2. (699 aa)    
Predicted Functional Partners:
TRDMT1
tRNA aspartic acid methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.751
TM2D1
TM2 domain containing 1.
      
 0.744
RCAN3
RCAN family member 3.
      
 0.724
ENDOD1
Endonuclease domain containing 1.
      
 0.703
FAM92A
Uncharacterized protein.
      
 0.582
A0A4W2E8I4
Uncharacterized protein.
      
 0.582
KLHL29
Kelch like family member 29.
      
 0.578
FBXO4
F-box protein 4.
      
 0.577
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.560
ARHGAP10
Rho GTPase activating protein 10.
    
   0.538
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.