STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSNA1SS nuclear autoantigen 1. (119 aa)    
Predicted Functional Partners:
POLR2J
RNA_pol_L_2 domain-containing protein.
   
    0.556
A0A4W2E7G3
RNA_pol_L_2 domain-containing protein.
   
    0.556
NUP43
Nucleoporin 43.
      
 0.497
RFC2
Replication factor C subunit 2.
   
  
 0.488
PSMC5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
   
   0.488
MTHFD2
Uncharacterized protein.
      
 0.473
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.