STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN12Lipocalin 12; Belongs to the calycin superfamily. Lipocalin family. (192 aa)    
Predicted Functional Partners:
A0A4W2BVG3
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.659
LCN8
Lipocalin 8; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.613
A0A4W2DPS8
Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.579
GDPD3
Glycerophosphodiester phosphodiesterase domain containing 3.
      
 0.577
C8G
Complement C8 gamma chain; Belongs to the calycin superfamily. Lipocalin family.
 
    
 0.541
A0A4W2E9T4
Uncharacterized protein; Belongs to the calycin superfamily. Lipocalin family.
      
 0.499
LCN1
Lipocalin 1; Belongs to the calycin superfamily. Lipocalin family.
   
 
 0.483
CDC73
Cell division cycle 73.
   
 0.440
PMP2
Peripheral myelin protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.425
FABP12
Fatty acid binding protein 12; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.425
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.