STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2DQ11RRM domain-containing protein. (101 aa)    
Predicted Functional Partners:
LRPPRC
Leucine rich pentatricopeptide repeat containing.
   
 
 0.852
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
 
 0.582
A0A4W2C197
Uncharacterized protein.
   
 
  0.578
A0A4W2F7F4
Uncharacterized protein.
   
 
  0.578
NDUFB6
NADH:ubiquinone oxidoreductase subunit B6.
   
 
  0.572
TOMM7
Uncharacterized protein.
   
  
 0.562
TOMM7-2
Uncharacterized protein.
   
  
 0.562
A0A4W2E0E9
Uncharacterized protein.
   
 
  0.561
SNW1
SNW domain containing 1.
   
 
 0.561
A0A4W2F5F2
Uncharacterized protein.
   
 
  0.561
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.