STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSC22D4TSC22 domain family member 4. (415 aa)    
Predicted Functional Partners:
NRBP1
Nuclear receptor binding protein 1.
    
 
 0.787
C7orf61
Chromosome 7 open reading frame 61.
 
    
 0.725
GIGYF1
GRB10 interacting GYF protein 1.
      
 0.577
COPS6
COP9 signalosome subunit 6.
   
  
 0.570
SGK3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 0.553
TSC22D1
TSC22 domain family member 1.
    
 
0.542
SGK1
Non-specific serine/threonine protein kinase.
   
 0.515
SGK2
Non-specific serine/threonine protein kinase.
   
 0.515
A0A4W2C568
Pkinase_Tyr domain-containing protein.
    
 
 0.503
A0A4W2EFF5
Uncharacterized protein.
    
 
 0.503
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.