STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113887285Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (275 aa)    
Predicted Functional Partners:
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.975
HMOX2
Heme oxygenase 2.
     
 0.950
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.908
HMOX1
Heme oxygenase 1.
     
 0.891
B3GLCT
Beta 3-glucosyltransferase.
      
 0.715
FBXL15
F-box and leucine rich repeat protein 15.
      
 0.712
MRPL35
Mitochondrial ribosomal protein L35.
   
  
 0.704
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
   
  
 0.702
PMPCB
Peptidase, mitochondrial processing beta subunit; Belongs to the peptidase M16 family.
   
  
 0.691
RTN4IP1
Reticulon 4 interacting protein 1.
   
  
 0.681
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.