STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2DT24BTB domain-containing protein. (489 aa)    
Predicted Functional Partners:
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.493
USHBP1
USH1 protein network component harmonin binding protein 1.
    
 
 0.491
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
    
 
 0.490
KPNA1
Karyopherin subunit alpha 1.
    
 
 0.465
SPATA6
Spermatogenesis associated 6.
      
 0.465
SPIN4
Spindlin family member 4.
      
 0.424
PRR14
Proline rich 14.
      
 0.420
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
      
 0.420
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
      
 0.403
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.