STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD4GRAM domain containing 4. (660 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
    
 0.600
CCNJ
Cyclin J; Belongs to the cyclin family.
   
 
 0.589
BTBD9
BTB domain containing 9.
    
 
 0.537
SWT1
SWT1 RNA endoribonuclease homolog.
      
 0.499
KIAA1324
KIAA1324.
    
 0.497
ACOT13
Acyl-CoA thioesterase 13.
     
 0.490
RNF130
Ring finger protein 130.
      
 0.485
SLC37A1
Solute carrier family 37 member 1.
      
 0.468
CMBL
Carboxymethylenebutenolidase homolog.
      
 0.467
SEL1L3
SEL1L family member 3.
      
 0.467
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.