STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2DVZ3Histone domain-containing protein; Belongs to the histone H2B family. (67 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.658
HIST3H3
Histone H3; Belongs to the histone H3 family.
   
 0.559
A0A4W2CJC7
Histone H3; Belongs to the histone H3 family.
   
 0.533
LOC113891642
Histone domain-containing protein.
   
 0.533
A0A4W2EST9
Histone H3; Belongs to the histone H3 family.
   
 0.533
A0A4W2GW60
Histone domain-containing protein.
   
 0.533
H2AFY
H2A histone family member Y.
   
 0.527
H2AFJ
Histone H2A; Belongs to the histone H2A family.
   
 0.524
A0A4W2BN79
Uncharacterized protein.
    
 0.522
KDM6B
Lysine demethylase 6B.
    
 0.522
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.