STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLFHLF transcription factor, PAR bZIP family member. (327 aa)    
Predicted Functional Partners:
LOC113879686
Cytochrome c oxidase subunit 5A.
   
 0.640
COX11
Cytochrome c oxidase copper chaperone COX11.
     
 0.617
SF3B1
Splicing factor 3b subunit 1.
      
 0.580
LINC01862
Long intergenic non-protein coding RNA 1862.
    
 
0.560
NFIL3
Nuclear factor, interleukin 3 regulated.
    
 
0.560
C1orf198
Chromosome 1 open reading frame 198.
   
 0.530
A0A4W2EMJ5
Uncharacterized protein.
   
 0.530
MAX
MYC associated factor X.
    
 0.519
LTF
Lactotransferrin; Belongs to the transferrin family.
   
 
 0.496
A0A4W2D7G9
Uncharacterized protein.
   
 0.494
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.