STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1109KIAA1109. (5002 aa)    
Predicted Functional Partners:
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
   
   0.733
PUS7
Pseudouridine synthase 7.
      
 0.605
ADAD1
Adenosine deaminase domain containing 1.
      
 0.601
A0A4W2BWK5
Uncharacterized protein.
    
 
 0.563
KRT39
Keratin 39; Belongs to the intermediate filament family.
      
 0.530
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.502
DRAP1
DR1 associated protein 1.
      
 0.499
ARHGEF19
Rho guanine nucleotide exchange factor 19.
      
 0.499
KRT40
Keratin 40; Belongs to the intermediate filament family.
    
 
 0.487
AKAP6
A-kinase anchoring protein 6.
      
 0.482
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.