STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXN4Forkhead box N4. (546 aa)    
Predicted Functional Partners:
PTF1A
Pancreas associated transcription factor 1a.
   
 
 0.849
ZNF862
Zinc finger protein 862.
   
  0.824
BARHL2
BarH like homeobox 2.
   
 0.764
CCDC177
Coiled-coil domain containing 177.
    
 
 0.701
HRCT1
Histidine rich carboxyl terminus 1.
      
 0.695
ATOH7
Atonal bHLH transcription factor 7.
   
  
 0.636
DLL4
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
   
 0.613
ASCL1
Achaete-scute family bHLH transcription factor 1.
   
 
 0.605
PAX6
Paired box 6.
   
 0.589
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
    
 
 0.578
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.