STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113879739Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
RAPGEF2
Rap guanine nucleotide exchange factor 2.
   
 0.929
RHOA
Ras homolog family member A.
   
0.903
ITSN2
Intersectin 2.
    
 0.792
A0A4W2ERJ0
EH domain-containing protein.
    
 0.792
A0A4W2FQ17
Uncharacterized protein.
    
 0.792
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.668
ITSN1
Intersectin 1.
    
 0.668
NF1
Neurofibromin 1.
   
 0.604
SHANK1
SH3 and multiple ankyrin repeat domains 1.
   
 0.601
A0A4W2BZ09
Uncharacterized protein.
    
 0.599
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.