STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1CCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (337 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
   
 0.984
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
    
 0.972
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.971
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.970
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
0.969
SHOC2
SHOC2 leucine rich repeat scaffold protein.
    
 0.968
WDR33
WD repeat domain 33.
   
 0.968
PPP1R12A
Protein phosphatase 1 regulatory subunit.
   
 0.968
EIF2S1
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.965
RB1
RB transcriptional corepressor 1.
   
 0.962
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.