STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGBP1CGG triplet repeat binding protein 1. (167 aa)    
Predicted Functional Partners:
ATXN7L3B
Ataxin 7 like 3B.
   
 0.739
URB1
URB1 ribosome biogenesis homolog.
      
 0.682
CLN8
CLN8 transmembrane ER and ERGIC protein.
    
 
 0.612
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1.
   
 
 0.589
SP3
Sp3 transcription factor.
   
 0.554
TCERG1
Transcription elongation regulator 1.
   
  
 0.533
KPNA2
Importin subunit alpha; Functions in nuclear protein import.
    
 0.487
A0A4W2BTK6
THAP-type domain-containing protein.
    
 0.480
THAP12
THAP-type domain-containing protein.
    
 0.480
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
 0.471
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.