Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FOXA2 | NANOG | A0A4W2CQ25 | A0A4W2C9C4 | Forkhead box A2. | Homeobox domain-containing protein. | 0.773 |
FOXA2 | PAX6 | A0A4W2CQ25 | A0A4W2E3X2 | Forkhead box A2. | Paired box 6. | 0.778 |
FOXA2 | SOX17 | A0A4W2CQ25 | A0A4W2EC04 | Forkhead box A2. | SRY-box transcription factor 17. | 0.726 |
FOXG1 | GFAP | A0A4W2EJ36 | A0A4W2CBW4 | Forkhead box G1. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.468 |
FOXG1 | OLIG2 | A0A4W2EJ36 | A0A4W2EYL3 | Forkhead box G1. | Oligodendrocyte transcription factor 2. | 0.422 |
FOXG1 | PAX6 | A0A4W2EJ36 | A0A4W2E3X2 | Forkhead box G1. | Paired box 6. | 0.798 |
FOXG1 | SATB2 | A0A4W2EJ36 | A0A4W2F540 | Forkhead box G1. | DNA-binding protein SATB. | 0.727 |
FOXG1 | TBR1 | A0A4W2EJ36 | A0A4W2GKK2 | Forkhead box G1. | T-box brain transcription factor 1. | 0.789 |
GFAP | FOXG1 | A0A4W2CBW4 | A0A4W2EJ36 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Forkhead box G1. | 0.468 |
GFAP | NANOG | A0A4W2CBW4 | A0A4W2C9C4 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Homeobox domain-containing protein. | 0.482 |
GFAP | OLIG2 | A0A4W2CBW4 | A0A4W2EYL3 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Oligodendrocyte transcription factor 2. | 0.732 |
GFAP | PAX6 | A0A4W2CBW4 | A0A4W2E3X2 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Paired box 6. | 0.762 |
GFAP | RCVRN | A0A4W2CBW4 | A0A4W2DY60 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Recoverin. | 0.425 |
GFAP | SATB2 | A0A4W2CBW4 | A0A4W2F540 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | DNA-binding protein SATB. | 0.708 |
GFAP | TBR1 | A0A4W2CBW4 | A0A4W2GKK2 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | T-box brain transcription factor 1. | 0.725 |
NANOG | FOXA2 | A0A4W2C9C4 | A0A4W2CQ25 | Homeobox domain-containing protein. | Forkhead box A2. | 0.773 |
NANOG | GFAP | A0A4W2C9C4 | A0A4W2CBW4 | Homeobox domain-containing protein. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.482 |
NANOG | OLIG2 | A0A4W2C9C4 | A0A4W2EYL3 | Homeobox domain-containing protein. | Oligodendrocyte transcription factor 2. | 0.444 |
NANOG | PAX6 | A0A4W2C9C4 | A0A4W2E3X2 | Homeobox domain-containing protein. | Paired box 6. | 0.788 |
NANOG | SOX17 | A0A4W2C9C4 | A0A4W2EC04 | Homeobox domain-containing protein. | SRY-box transcription factor 17. | 0.861 |
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