STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS7ACOP9 signalosome subunit 7A. (298 aa)    
Predicted Functional Partners:
COPS4
COP9 signalosome subunit 4.
   
 0.989
COPS3
COP9 signalosome subunit 3.
    
 0.988
COPS2
COP9 signalosome subunit 2.
    
 0.985
COPS8
COP9 signalosome subunit 8.
    
 0.985
GPS1
G protein pathway suppressor 1.
  
 0.984
COPS6
COP9 signalosome subunit 6.
    
 0.983
COPS5
COP9 signalosome subunit 5.
    
 0.977
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
    
 0.881
COPS7B
COP9 signalosome subunit 7B.
  
 
0.862
DDB2
Damage specific DNA binding protein 2.
    
 0.845
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.