STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSI1Musashi RNA binding protein 1. (418 aa)    
Predicted Functional Partners:
MSI2
Musashi RNA binding protein 2.
  
  
 
0.894
DAZAP1
DAZ associated protein 1.
  
  
0.830
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.807
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
  
 
 0.722
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
      
 0.588
SMOC2
SPARC related modular calcium binding 2.
   
  
 0.583
OLFM4
Olfactomedin 4.
      
 0.577
TNPO1
Transportin 1.
   
 
 0.548
TNPO2
Transportin 2.
   
 
 0.548
CLCA4
Chloride channel accessory 4.
    
 
 0.499
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.