Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFF4 | MED13 | A0A4W2HF37 | A0A4W2BS26 | AF4/FMR2 family member 4. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.822 |
| AFF4 | TRIP11 | A0A4W2HF37 | A0A4W2E7U1 | AF4/FMR2 family member 4. | Thyroid hormone receptor interactor 11. | 0.561 |
| ARF5 | TRIP11 | A0A4W2CT66 | A0A4W2E7U1 | ADP ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family. | Thyroid hormone receptor interactor 11. | 0.548 |
| ARF5 | USO1 | A0A4W2CT66 | A0A4W2IH03 | ADP ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family. | USO1 vesicle transport factor. | 0.548 |
| ARL4C | TRIP11 | A0A4W2GR96 | A0A4W2E7U1 | ADP ribosylation factor like GTPase 4C; Belongs to the small GTPase superfamily. Arf family. | Thyroid hormone receptor interactor 11. | 0.535 |
| CEP350 | MED13 | A0A4W2C815 | A0A4W2BS26 | Centrosomal protein 350. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.571 |
| CEP350 | TRIP11 | A0A4W2C815 | A0A4W2E7U1 | Centrosomal protein 350. | Thyroid hormone receptor interactor 11. | 0.556 |
| IFT20 | TRIP11 | A0A4W2E697 | A0A4W2E7U1 | Intraflagellar transport 20. | Thyroid hormone receptor interactor 11. | 0.892 |
| MED13 | AFF4 | A0A4W2BS26 | A0A4W2HF37 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | AF4/FMR2 family member 4. | 0.822 |
| MED13 | CEP350 | A0A4W2BS26 | A0A4W2C815 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Centrosomal protein 350. | 0.571 |
| MED13 | TMTC3 | A0A4W2BS26 | A0A4W2D492 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Transmembrane O-mannosyltransferase targeting cadherins 3. | 0.422 |
| MED13 | TRIP11 | A0A4W2BS26 | A0A4W2E7U1 | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Thyroid hormone receptor interactor 11. | 0.614 |
| MIB1 | TRIP11 | A0A4W2DUW9 | A0A4W2E7U1 | Mindbomb E3 ubiquitin protein ligase 1. | Thyroid hormone receptor interactor 11. | 0.536 |
| SEC24B | TRIP11 | A0A4W2DH59 | A0A4W2E7U1 | SEC24 homolog B, COPII coat complex component. | Thyroid hormone receptor interactor 11. | 0.561 |
| SEC24B | USO1 | A0A4W2DH59 | A0A4W2IH03 | SEC24 homolog B, COPII coat complex component. | USO1 vesicle transport factor. | 0.579 |
| TMTC3 | MED13 | A0A4W2D492 | A0A4W2BS26 | Transmembrane O-mannosyltransferase targeting cadherins 3. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.422 |
| TMTC3 | TRIP11 | A0A4W2D492 | A0A4W2E7U1 | Transmembrane O-mannosyltransferase targeting cadherins 3. | Thyroid hormone receptor interactor 11. | 0.568 |
| TRIP11 | AFF4 | A0A4W2E7U1 | A0A4W2HF37 | Thyroid hormone receptor interactor 11. | AF4/FMR2 family member 4. | 0.561 |
| TRIP11 | ARF5 | A0A4W2E7U1 | A0A4W2CT66 | Thyroid hormone receptor interactor 11. | ADP ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family. | 0.548 |
| TRIP11 | ARL4C | A0A4W2E7U1 | A0A4W2GR96 | Thyroid hormone receptor interactor 11. | ADP ribosylation factor like GTPase 4C; Belongs to the small GTPase superfamily. Arf family. | 0.535 |
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