STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM62Tripartite motif containing 62. (475 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.783
TRIM9
Tripartite motif containing 9.
   
 
 0.742
TRIM66
Tripartite motif containing 66.
      
 0.724
CARD9
Caspase recruitment domain family member 9.
   
 
 0.677
TRIM46
Tripartite motif containing 46.
      
 0.598
TRIM8
Tripartite motif containing 8.
      
0.578
ZNF362
Zinc finger protein 362.
  
 0.531
TRIM23
Tripartite motif containing 23.
    
 0.521
TRIM3
Tripartite motif containing 3.
   
  
0.516
APBB2
Amyloid beta precursor protein binding family B member 2.
    
 0.506
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.