STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4W2EG22Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
MRPS18C
Mitochondrial ribosomal protein S18C; Belongs to the bacterial ribosomal protein bS18 family.
   
 
 0.897
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.876
MRPL55
Mitochondrial ribosomal protein L55.
   
 
 0.864
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.863
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.862
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 0.860
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.858
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.857
A0A4W2EBB7
Uncharacterized protein.
   
 
 0.853
MRPL30
Ribosomal_L30 domain-containing protein.
   
   0.853
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.