STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP50Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. (373 aa)    
Predicted Functional Partners:
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 0.749
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.721
A0A4W2EUL6
Uncharacterized protein.
      
 0.721
CYLD
CYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family.
      
 0.688
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.614
JOSD2
Josephin domain containing 2.
    
 
 0.600
UCHL3
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.583
USPL1
Ubiquitin specific peptidase like 1.
    
 
 0.582
ZRANB1
Zinc finger RANBP2-type containing 1.
      
 0.582
USP30
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.528
Your Current Organism:
Bos indicus
NCBI taxonomy Id: 30522
Other names: B. indicus x Bos taurus, Bos indicus x Bos taurus, Bos primigenius indicus x Bos primigenius taurus, Bos taurus indicus x Bos taurus taurus, hybrid cattle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.